Big Spider, Big Genome: Chromosome-level genome of a North American tarantula (Aphonopelma marxi) and comparative genomics across 300 million years of spider evolution

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  Image Credit: WikiCommons Big Spider, Big Genome: Chromosome-level genome of a North American tarantula (Aphonopelma marxi) and comparative genomics across 300 million years of spider evolution Abstract The comparison of chromosome-level genomes allows biologists to investigate new axes of organismal evolution. Spiders comprise a significant proportion of known arachnid diversity, with many complex morphologies and unique natural histories, yet comparative genomics in spiders has been limited due to the number of available genomes. We present a de novo chromosomal reference genome of a mature male tarantula, Aphonopelma marxi, and comparatively examine spider genome evolution across the Order Araneae. Using PacBio HiFi and Hi-C sequencing, the final 6.5 Gb assembly consists of 17 autosomes, 1 X chromosome, and 127 unplaced scaffolds, with an N50 of 370 Mb and Arachnida (odb10; 2934 genes) BUSCO of 96.7%. By comparing 20 additional spider genomes from 15 families, we find mygalomo...

Latitude Matters: A Global Phylogeographic Perspective on Climate-Driven Demographic Responses in Tarantulas

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Latitude Matters: A Global Phylogeographic Perspective on Climate-Driven Demographic Responses in Tarantulas

Abstract

To investigate how past climate change has shaped the genetic diversity and demographic responses of tarantulas across latitudes and to test whether climate and demography relationships vary with latitude. Location: Global, spanning tropical to temperate regions. Taxon: Tarantulas (family Theraphosidae). Methods: We compiled mitochondrial Cytochrome oxidase I (COI) sequences for 48 tarantula species worldwide, including newly generated sequences, to estimate nucleotide diversity and Tajima's D. Species distribution models (SDMs) were constructed under present-day and Last Glacial Maximum (LGM) climatic conditions to quantify changes in habitat suitability since the LGM. Using generalized linear models (GLMs), we tested whether genetic and demographic metrics were associated with latitude and climate-driven habitat change and whether their relationship varied with latitude. Results: Pairwise correlations among latitude, habitat change and genetic metrics showed no significant associations. However, GLMs revealed a significant interaction: the effect of habitat suitability change on Tajima's D was strongly positive at high latitudes but negative or negligible at low latitudes. This indicates that demographic responses to past climate change varied with latitude. Several high-latitude species showed genetic signatures of demographic expansion and range increase since the LGM. Main Conclusions: Our results support the hypothesis that species at higher latitudes experience stronger demographic fluctuations due to historical climate change, aligning with Darwin's early predictions. Moreover, patterns of demographic growth in temperate taxa suggest that some species may benefit from recent warming, consistent with Janzen's climatic variability hypothesis. These findings demonstrate that climate-driven genetic and demographic responses in tarantulas are shaped by latitude and highlight the importance of integrating phylogeography with ecological niche modeling to understand species' resilience under climate change.

Latitude Matters: A Global Phylogeographic Perspective on Climate-Driven Demographic Responses in Tarantulas. Aritra Biswas, Praveen Karanth, bioRxiv 2025.06.08.658479;